Software

Library

  • CRF: R package for modeling and computational tools for conditional random fields (CRF) model as well as other probabilistic undirected graphical models of discrete data with pairwise and unary potentials. [CRAN, R-Forge, GitHub]

Bioinformatics Tools

  • Corbi: R package for collection of rudimentary bioinformatics tools. [CRAN, R-Forge, GitHub]
  • CopTea: R package for combinatorial optimization based enrichment analysis. [GitHub]